Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCNAP12004 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCNAP12004 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCNAP12004 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14□□□□□ -0.17
PCNAP12004 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCNAP12004 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14□□□□□ -0.17
PCNAP12004 AC111170.3-201ENST00000624282 2464 ntBASIC14□□□□□ -0.17
PCNAP12004 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PCNAP12004 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PCNAP12004 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCNAP12004 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14□□□□□ -0.17
PCNAP12004 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PCNAP12004 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14□□□□□ -0.17
PCNAP12004 AC099336.1-201ENST00000417053 1171 ntBASIC14□□□□□ -0.17
PCNAP12004 AL161932.2-201ENST00000435436 679 ntBASIC14□□□□□ -0.17
PCNAP12004 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 CSF2RBP1-201ENST00000447905 391 ntBASIC14□□□□□ -0.17
PCNAP12004 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14□□□□□ -0.17
PCNAP12004 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14□□□□□ -0.17
PCNAP12004 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14□□□□□ -0.17
PCNAP12004 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14□□□□□ -0.17
PCNAP12004 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCNAP12004 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14□□□□□ -0.17
PCNAP12004 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14□□□□□ -0.17
PCNAP12004 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14□□□□□ -0.17
PCNAP12004 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCNAP12004 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
PCNAP12004 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCNAP12004 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PCNAP12004 Z82170.1-201ENST00000625081 3192 ntBASIC13.99□□□□□ -0.17
PCNAP12004 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.99□□□□□ -0.17
PCNAP12004 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.99□□□□□ -0.17
PCNAP12004 AC079178.1-201ENST00000420915 656 ntBASIC13.99□□□□□ -0.17
PCNAP12004 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.99□□□□□ -0.17
PCNAP12004 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.99□□□□□ -0.17
PCNAP12004 AC100827.2-201ENST00000563214 1194 ntBASIC13.99□□□□□ -0.17
PCNAP12004 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 AC017083.2-201ENST00000608069 979 ntBASIC13.99□□□□□ -0.17
PCNAP12004 MIR6720-201ENST00000611664 98 ntBASIC13.99□□□□□ -0.17
PCNAP12004 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 TMBIM7P-202ENST00000641474 1516 ntBASIC13.99□□□□□ -0.17
PCNAP12004 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 AC023794.5-201ENST00000564380 2157 ntBASIC13.99□□□□□ -0.17
PCNAP12004 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.99□□□□□ -0.17
PCNAP12004 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.99□□□□□ -0.17
PCNAP12004 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCNAP12004 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms