Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC19.57■□□□□ 0.72
LAMC1P11047 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
LAMC1P11047 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC19.57■□□□□ 0.72
LAMC1P11047 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC19.57■□□□□ 0.72
LAMC1P11047 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LAMC1P11047 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC19.57■□□□□ 0.72
LAMC1P11047 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC19.57■□□□□ 0.72
LAMC1P11047 HIST1H2APS2-201ENST00000454426 370 ntBASIC19.57■□□□□ 0.72
LAMC1P11047 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC19.57■□□□□ 0.72
LAMC1P11047 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.57■□□□□ 0.72
LAMC1P11047 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.57■□□□□ 0.72
LAMC1P11047 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC19.57■□□□□ 0.72
LAMC1P11047 FBXO36P1-201ENST00000579006 471 ntBASIC19.57■□□□□ 0.72
LAMC1P11047 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LAMC1P11047 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
LAMC1P11047 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LAMC1P11047 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC19.57■□□□□ 0.72
LAMC1P11047 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LAMC1P11047 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 NCLP1-201ENST00000445357 1963 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LAMC1P11047 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LAMC1P11047 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 SIRPB3P-201ENST00000340424 1216 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LAMC1P11047 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 CTBP2P6-201ENST00000526402 1229 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC19.56■□□□□ 0.72
LAMC1P11047 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC19.56■□□□□ 0.72
LAMC1P11047 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.56■□□□□ 0.72
LAMC1P11047 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 RCC2P5-201ENST00000492126 1487 ntBASIC19.56■□□□□ 0.72
LAMC1P11047 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC19.56■□□□□ 0.72
LAMC1P11047 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LAMC1P11047 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LAMC1P11047 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LAMC1P11047 AGAP10P-201ENST00000454844 2418 ntBASIC19.55■□□□□ 0.72
LAMC1P11047 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LAMC1P11047 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC19.55■□□□□ 0.72
LAMC1P11047 AP000354.1-201ENST00000396982 456 ntBASIC19.55■□□□□ 0.72
LAMC1P11047 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC19.55■□□□□ 0.72
LAMC1P11047 RN7SL288P-201ENST00000490496 291 ntBASIC19.55■□□□□ 0.72
LAMC1P11047 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LAMC1P11047 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LAMC1P11047 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 INTS4P1-203ENST00000641008 3683 ntBASIC19.55■□□□□ 0.72
LAMC1P11047 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LAMC1P11047 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
LAMC1P11047 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMC1P11047 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMC1P11047 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC19.54■□□□□ 0.72
LAMC1P11047 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC19.54■□□□□ 0.72
LAMC1P11047 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC19.54■□□□□ 0.72
LAMC1P11047 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC19.54■□□□□ 0.72
LAMC1P11047 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.54■□□□□ 0.72
LAMC1P11047 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC19.54■□□□□ 0.72
LAMC1P11047 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.54■□□□□ 0.72
LAMC1P11047 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMC1P11047 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LAMC1P11047 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms