Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 AC090643.2-201ENST00000623442 2029 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 USP17L6P-201ENST00000382470 1197 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 ISCA2P1-201ENST00000425548 448 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 AC069218.1-201ENST00000435269 762 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC12.93□□□□□ -0.34
FREM3P0C091 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 AC020922.3-201ENST00000595064 547 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 AC107464.3-201ENST00000609172 737 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
FREM3P0C091 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.93□□□□□ -0.34
FREM3P0C091 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 AL365181.3-201ENST00000605886 3222 ntBASIC12.93□□□□□ -0.34
FREM3P0C091 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 AC011742.3-201ENST00000439053 820 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 AC114947.1-202ENST00000514136 344 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.92□□□□□ -0.34
FREM3P0C091 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 AL022313.4-201ENST00000562756 2046 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM3P0C091 MIR557-201ENST00000385239 98 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 NOC2LP1-201ENST00000450578 752 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM3P0C091 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
FREM3P0C091 AC090857.1-201ENST00000527400 390 ntBASIC12.92□□□□□ -0.34
FREM3P0C091 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
FREM3P0C091 AL132994.1-201ENST00000554098 400 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 295 ms