Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.24■□□□□ 0.35
CSF1RP07333 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 AC099063.4-201ENST00000641099 1602 ntBASIC17.24■□□□□ 0.35
CSF1RP07333 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.24■□□□□ 0.35
CSF1RP07333 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSF1RP07333 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSF1RP07333 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.24■□□□□ 0.35
CSF1RP07333 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 AC089987.1-201ENST00000551654 2209 ntBASIC17.23■□□□□ 0.35
CSF1RP07333 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.23■□□□□ 0.35
CSF1RP07333 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CSF1RP07333 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 ACTBP14-201ENST00000411655 1089 ntBASIC17.23■□□□□ 0.35
CSF1RP07333 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.23■□□□□ 0.35
CSF1RP07333 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 REEP5-205ENST00000504247 480 ntTSL 5 BASIC17.23■□□□□ 0.35
CSF1RP07333 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CSF1RP07333 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CSF1RP07333 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.23■□□□□ 0.35
CSF1RP07333 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSF1RP07333 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSF1RP07333 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1RP07333 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 PGAM1P12-201ENST00000505622 748 ntBASIC17.22■□□□□ 0.35
CSF1RP07333 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1RP07333 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.22■□□□□ 0.35
CSF1RP07333 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC17.22■□□□□ 0.35
CSF1RP07333 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 AC073592.2-201ENST00000623062 780 ntBASIC17.22■□□□□ 0.35
CSF1RP07333 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 TSPY26P-202ENST00000565928 3884 ntBASIC17.22■□□□□ 0.35
CSF1RP07333 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC17.22■□□□□ 0.35
CSF1RP07333 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSF1RP07333 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSF1RP07333 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.21■□□□□ 0.35
CSF1RP07333 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.21■□□□□ 0.35
CSF1RP07333 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1RP07333 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSF1RP07333 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.21■□□□□ 0.35
CSF1RP07333 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms