Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ZIC3O60481 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ZIC3O60481 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.78□□□□□ -0.36
ZIC3O60481 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.77□□□□□ -0.36
ZIC3O60481 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.77□□□□□ -0.36
ZIC3O60481 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.77□□□□□ -0.36
ZIC3O60481 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
ZIC3O60481 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
ZIC3O60481 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
ZIC3O60481 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.77□□□□□ -0.36
ZIC3O60481 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
ZIC3O60481 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
ZIC3O60481 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
ZIC3O60481 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 PPP1R2P4-201ENST00000424051 595 ntBASIC12.77□□□□□ -0.37
ZIC3O60481 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.77□□□□□ -0.37
ZIC3O60481 SLC25A15P3-201ENST00000505530 290 ntBASIC12.77□□□□□ -0.37
ZIC3O60481 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.77□□□□□ -0.37
ZIC3O60481 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.77□□□□□ -0.37
ZIC3O60481 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.77□□□□□ -0.37
ZIC3O60481 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.77□□□□□ -0.37
ZIC3O60481 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.77□□□□□ -0.37
ZIC3O60481 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.77□□□□□ -0.37
ZIC3O60481 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.77□□□□□ -0.37
ZIC3O60481 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
ZIC3O60481 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 RCC2P1-201ENST00000452257 1476 ntBASIC12.77□□□□□ -0.37
ZIC3O60481 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.77□□□□□ -0.37
ZIC3O60481 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 AL139158.3-201ENST00000641212 1562 ntBASIC12.77□□□□□ -0.37
ZIC3O60481 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
ZIC3O60481 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ZIC3O60481 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.76□□□□□ -0.37
ZIC3O60481 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ZIC3O60481 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZIC3O60481 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.76□□□□□ -0.37
ZIC3O60481 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AL928654.5-201ENST00000624831 2501 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.76□□□□□ -0.37
ZIC3O60481 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 AL627422.1-201ENST00000434104 580 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.76□□□□□ -0.37
ZIC3O60481 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 AC095040.1-201ENST00000513286 675 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms