Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SSSCA1O60232 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 ARSEP1-201ENST00000420443 635 ntBASIC11.7□□□□□ -0.54
SSSCA1O60232 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.7□□□□□ -0.54
SSSCA1O60232 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.7□□□□□ -0.54
SSSCA1O60232 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.7□□□□□ -0.54
SSSCA1O60232 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
SSSCA1O60232 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.7□□□□□ -0.54
SSSCA1O60232 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SSSCA1O60232 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 KRT8P28-201ENST00000433288 1390 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 ABCD1P2-201ENST00000429313 1601 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 PUDPP3-201ENST00000445368 636 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 AC009477.1-201ENST00000452936 217 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.69□□□□□ -0.54
SSSCA1O60232 TPRX2P-201ENST00000535362 881 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC027612.4-201ENST00000605371 583 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 AC104506.1-201ENST00000609247 429 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AL590560.3-201ENST00000623350 461 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.69□□□□□ -0.54
SSSCA1O60232 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 PCDHB19P-202ENST00000625133 2914 ntBASIC11.69□□□□□ -0.54
SSSCA1O60232 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.69□□□□□ -0.54
SSSCA1O60232 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SSSCA1O60232 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.68□□□□□ -0.54
SSSCA1O60232 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
SSSCA1O60232 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SSSCA1O60232 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC11.68□□□□□ -0.54
SSSCA1O60232 VENTXP1-201ENST00000569334 2716 ntBASIC11.68□□□□□ -0.54
SSSCA1O60232 AC060814.4-201ENST00000594169 2163 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms