Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHL1O00533 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHL1O00533 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC18.07■□□□□ 0.48
CHL1O00533 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CHL1O00533 AC025186.1-201ENST00000478174 870 ntBASIC18.07■□□□□ 0.48
CHL1O00533 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.07■□□□□ 0.48
CHL1O00533 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.07■□□□□ 0.48
CHL1O00533 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CHL1O00533 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.07■□□□□ 0.48
CHL1O00533 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 AL359091.4-201ENST00000610052 409 ntBASIC18.07■□□□□ 0.48
CHL1O00533 AP003419.4-201ENST00000616071 517 ntBASIC18.07■□□□□ 0.48
CHL1O00533 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC18.07■□□□□ 0.48
CHL1O00533 AL161773.1-201ENST00000624845 863 ntBASIC18.07■□□□□ 0.48
CHL1O00533 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 NRADDP-202ENST00000641269 1585 ntBASIC18.07■□□□□ 0.48
CHL1O00533 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.07■□□□□ 0.48
CHL1O00533 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CHL1O00533 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHL1O00533 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CHL1O00533 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHL1O00533 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 SALL4P6-201ENST00000429385 1691 ntBASIC18.06■□□□□ 0.48
CHL1O00533 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC18.06■□□□□ 0.48
CHL1O00533 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.06■□□□□ 0.48
CHL1O00533 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 AC005722.1-201ENST00000431878 964 ntBASIC18.06■□□□□ 0.48
CHL1O00533 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.06■□□□□ 0.48
CHL1O00533 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.06■□□□□ 0.48
CHL1O00533 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.06■□□□□ 0.48
CHL1O00533 MIR4326-201ENST00000582203 59 ntBASIC18.06■□□□□ 0.48
CHL1O00533 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.06■□□□□ 0.48
CHL1O00533 AC012073.1-201ENST00000606114 1108 ntBASIC18.06■□□□□ 0.48
CHL1O00533 SNX1-214ENST00000625244 324 ntTSL 5 BASIC18.06■□□□□ 0.48
CHL1O00533 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CHL1O00533 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHL1O00533 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.06■□□□□ 0.48
CHL1O00533 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.05■□□□□ 0.48
CHL1O00533 AC090502.4-201ENST00000551714 1386 ntBASIC18.05■□□□□ 0.48
CHL1O00533 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CHL1O00533 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC18.05■□□□□ 0.48
CHL1O00533 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHL1O00533 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms