Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 ERP29P1-201ENST00000442902 706 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 RN7SL818P-201ENST00000485099 259 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 MRPL22P1-201ENST00000505398 616 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 RN7SL470P-201ENST00000583069 259 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 RN7SL725P-201ENST00000606439 259 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 AP001184.1-201ENST00000637936 376 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 AL591122.2-201ENST00000624125 1853 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 AC007686.3-201ENST00000619017 3487 ntBASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CTDP1Q9Y5B0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AL512306.1-201ENST00000432698 848 ntBASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AC098934.1-203ENST00000442868 1262 ntBASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AC018463.1-201ENST00000456674 917 ntBASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTDP1Q9Y5B0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 HIST2H2BA-201ENST00000412169 381 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 TPT1P11-201ENST00000458482 498 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 RPL18AP3-201ENST00000462885 528 ntBASIC16.48■□□□□ 0.23
CTDP1Q9Y5B0 OR5BD1P-201ENST00000532527 817 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms