Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFT52Q9Y366 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFT52Q9Y366 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
IFT52Q9Y366 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.48□□□□□ -0.25
IFT52Q9Y366 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AC131212.3-201ENST00000624087 4219 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 KRT90P-201ENST00000549264 1064 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 AL596325.1-201ENST00000563991 1082 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AC073413.1-201ENST00000603927 732 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 AL358472.3-201ENST00000608147 415 ntBASIC13.47□□□□□ -0.25
IFT52Q9Y366 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
IFT52Q9Y366 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
IFT52Q9Y366 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 USP17L6P-201ENST00000382470 1197 ntBASIC13.46□□□□□ -0.25
IFT52Q9Y366 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AC010141.1-201ENST00000411585 623 ntBASIC13.46□□□□□ -0.25
IFT52Q9Y366 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 AC244669.2-201ENST00000612320 853 ntBASIC13.46□□□□□ -0.25
IFT52Q9Y366 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.46□□□□□ -0.25
IFT52Q9Y366 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms