Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AP003040.1-201ENST00000532044 1024 ntBASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AC005746.3-201ENST00000614751 393 ntBASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 AL050341.2-201ENST00000567508 1541 ntBASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZC3H4Q9UPT8 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CICP23-201ENST00000605013 2741 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AP003680.1-201ENST00000598970 3660 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CCT8L1P-201ENST00000465400 1674 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AC015818.1-201ENST00000451011 244 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 TBC1D3P6-201ENST00000505954 962 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 ABCC6P1-203ENST00000565566 1170 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 ACTBP9-201ENST00000587663 1099 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 AC010531.8-201ENST00000623341 685 ntBASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZC3H4Q9UPT8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 AC126365.1-201ENST00000578585 1514 ntBASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZC3H4Q9UPT8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 KRT18P33-201ENST00000398525 1043 ntBASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 AC103563.1-201ENST00000429316 123 ntBASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 RPL29P2-201ENST00000488409 460 ntBASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 CLPP-205ENST00000596605 646 ntTSL 2 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZC3H4Q9UPT8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms