Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 GRK6P1-201ENST00000400595 1711 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 AL627231.1-201ENST00000394467 1125 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 RPL8P2-201ENST00000430538 502 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MIR3147-201ENST00000577811 66 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MIR6769A-201ENST00000617340 73 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPA1Q9UND3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 OR2K2-202ENST00000374428 1038 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AC026320.2-201ENST00000434379 478 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 NOC2LP1-201ENST00000450578 752 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RN7SL258P-201ENST00000478664 300 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AC103691.2-201ENST00000618824 433 ntBASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
NPIPA1Q9UND3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms