Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL109837.1-201ENST00000603272 613 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 AC103691.2-201ENST00000618824 433 ntBASIC14.29□□□□□ -0.12
SPASTQ9UBP0 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SPASTQ9UBP0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 NOC2LP1-201ENST00000450578 752 ntBASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 RN7SL67P-201ENST00000492147 296 ntBASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AP001267.2-201ENST00000532619 2086 ntBASIC14.28□□□□□ -0.12
SPASTQ9UBP0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.28□□□□□ -0.12
SPASTQ9UBP0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.28□□□□□ -0.12
SPASTQ9UBP0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SPASTQ9UBP0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.27□□□□□ -0.12
SPASTQ9UBP0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SPASTQ9UBP0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms