Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 SSR4P1-203ENST00000599569 2260 ntBASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 RN7SKP230-201ENST00000365642 335 ntBASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 MIR645-201ENST00000385283 94 ntBASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AC069421.1-201ENST00000447462 323 ntBASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PFN2-212ENST00000490975 858 ntTSL 4 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 VENTXP3-201ENST00000546480 773 ntBASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CNTNAP3Q9BZ76 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 RNVU1-8-201ENST00000364272 125 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 MIR181D-201ENST00000384853 137 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 MIR193A-201ENST00000384882 88 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC006518.1-201ENST00000541449 943 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 RN7SL665P-201ENST00000578793 300 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 MIR5193-201ENST00000584510 109 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 AC148476.1-201ENST00000622182 705 ntBASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC13.6□□□□□ -0.23
CNTNAP3Q9BZ76 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms