Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 BAATP1-201ENST00000412284 1225 ntBASIC12.32□□□□□ -0.44
NICN1Q9BSH3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 RNA5SP421-201ENST00000516864 134 ntBASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AP003171.2-201ENST00000528208 925 ntBASIC12.32□□□□□ -0.44
NICN1Q9BSH3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 RFPL4AP1-201ENST00000530883 850 ntBASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 AL033527.5-201ENST00000641382 801 ntBASIC12.32□□□□□ -0.44
NICN1Q9BSH3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
NICN1Q9BSH3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 CICP12-201ENST00000455801 843 ntBASIC12.31□□□□□ -0.44
NICN1Q9BSH3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 AC106760.1-201ENST00000508690 800 ntBASIC12.31□□□□□ -0.44
NICN1Q9BSH3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 MIR4683-201ENST00000579659 81 ntBASIC12.31□□□□□ -0.44
NICN1Q9BSH3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 ECM1P1-201ENST00000604092 1279 ntBASIC12.31□□□□□ -0.44
NICN1Q9BSH3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.31□□□□□ -0.44
NICN1Q9BSH3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms