Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 FDPSP7-201ENST00000429043 1054 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 CCND3P1-201ENST00000438347 580 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 CDK4P1-201ENST00000454213 828 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 RN7SL523P-201ENST00000484401 298 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC147876.1-201ENST00000504408 322 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 RN7SL605P-201ENST00000577229 281 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC016582.2-202ENST00000587765 1094 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 AC245369.7-201ENST00000631386 350 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 AL357143.1-203ENST00000639750 881 ntBASIC16.93■□□□□ 0.3
SNED1Q8TER0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNED1Q8TER0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.93■□□□□ 0.3
SNED1Q8TER0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 USP17L6P-201ENST00000382470 1197 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 PSME2P2-201ENST00000453033 700 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 RN7SL684P-201ENST00000465665 294 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AC011431.1-201ENST00000512971 230 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AC048382.6-201ENST00000621980 1223 ntBASIC16.92■□□□□ 0.3
SNED1Q8TER0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNED1Q8TER0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNED1Q8TER0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNED1Q8TER0 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 MPV17-209ENST00000405983 859 ntTSL 5 BASIC16.91■□□□□ 0.3
SNED1Q8TER0 AC098657.1-201ENST00000416270 1135 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms