Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 AC113367.3-201ENST00000508316 1912 ntBASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 FGFR3P1-201ENST00000449999 601 ntBASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 AC005632.3-201ENST00000605544 308 ntBASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.24□□□□□ -0.29
H3F3CQ6NXT2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 BRD7P5-201ENST00000299197 1822 ntBASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC007326.1-201ENST00000604539 458 ntBASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AC073352.2-201ENST00000609385 439 ntBASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
H3F3CQ6NXT2 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 LINC01815-202ENST00000641468 1409 ntBASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 CCT8L1P-201ENST00000465400 1674 ntBASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3CQ6NXT2 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 288 ms