Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CERKLQ49MI3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC097065.1-201ENST00000425737 517 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 RPL13AP19-201ENST00000434320 584 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 RPL35P9-201ENST00000446059 350 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 LINC00634-202ENST00000505157 222 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC091769.1-201ENST00000619576 568 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC002044.2-201ENST00000624910 970 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AC138761.6-201ENST00000583997 1423 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 TBC1D27-202ENST00000424239 1573 ntBASIC16.58■□□□□ 0.24
CERKLQ49MI3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.58■□□□□ 0.24
CERKLQ49MI3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CERKLQ49MI3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AC226150.1-201ENST00000544259 466 ntBASIC16.57■□□□□ 0.24
CERKLQ49MI3 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 LINC00552-201ENST00000625151 2579 ntBASIC16.57■□□□□ 0.24
CERKLQ49MI3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CERKLQ49MI3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.57■□□□□ 0.24
CERKLQ49MI3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CERKLQ49MI3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 AL139158.3-201ENST00000641212 1562 ntBASIC16.56■□□□□ 0.24
CERKLQ49MI3 AC004554.1-201ENST00000422830 1468 ntBASIC16.56■□□□□ 0.24
CERKLQ49MI3 AC020910.6-201ENST00000623084 1459 ntBASIC16.56■□□□□ 0.24
CERKLQ49MI3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.56■□□□□ 0.24
CERKLQ49MI3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CERKLQ49MI3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CERKLQ49MI3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.56■□□□□ 0.24
CERKLQ49MI3 AC092573.1-201ENST00000433054 884 ntBASIC16.56■□□□□ 0.24
CERKLQ49MI3 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CERKLQ49MI3 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms