Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDK5Q00535 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CDK5Q00535 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDK5Q00535 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDK5Q00535 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CDK5Q00535 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CDK5Q00535 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.9□□□□□ -0.34
CDK5Q00535 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
CDK5Q00535 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CDK5Q00535 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CDK5Q00535 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CDK5Q00535 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
CDK5Q00535 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
CDK5Q00535 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CDK5Q00535 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDK5Q00535 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CDK5Q00535 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
CDK5Q00535 AL590824.1-201ENST00000403828 1349 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.89□□□□□ -0.35
CDK5Q00535 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.89□□□□□ -0.35
CDK5Q00535 AC115284.2-201ENST00000624646 2054 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 CR383656.2-201ENST00000548656 2254 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 FAM197Y7-201ENST00000432892 766 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 C2orf27AP3-201ENST00000434123 579 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.89□□□□□ -0.35
CDK5Q00535 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.89□□□□□ -0.35
CDK5Q00535 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.89□□□□□ -0.35
CDK5Q00535 AC132192.2-201ENST00000596206 1147 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 AL354718.3-201ENST00000616414 581 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 CR382287.1-201ENST00000623954 586 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.89□□□□□ -0.35
CDK5Q00535 AL591163.1-201ENST00000641757 987 ntBASIC12.89□□□□□ -0.35
CDK5Q00535 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CDK5Q00535 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CDK5Q00535 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.89□□□□□ -0.35
CDK5Q00535 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CDK5Q00535 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CDK5Q00535 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
CDK5Q00535 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CDK5Q00535 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms