Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 KRT8P29-201ENST00000420409 1371 ntBASIC15.7■□□□□ 0.1
PMS1P54277 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.7■□□□□ 0.1
PMS1P54277 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 AC004623.1-201ENST00000624592 2127 ntBASIC15.7■□□□□ 0.1
PMS1P54277 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.7■□□□□ 0.1
PMS1P54277 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PMS1P54277 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PMS1P54277 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 AHCYP4-201ENST00000419201 1315 ntBASIC15.69■□□□□ 0.1
PMS1P54277 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PMS1P54277 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
PMS1P54277 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.69■□□□□ 0.1
PMS1P54277 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.69■□□□□ 0.1
PMS1P54277 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 AC027612.1-201ENST00000445234 2395 ntBASIC15.69■□□□□ 0.1
PMS1P54277 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.69■□□□□ 0.1
PMS1P54277 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 PTENP1-202ENST00000532280 3996 ntBASIC15.69■□□□□ 0.1
PMS1P54277 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PMS1P54277 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.69■□□□□ 0.1
PMS1P54277 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC15.69■□□□□ 0.1
PMS1P54277 Z93015.1-201ENST00000451718 390 ntBASIC15.69■□□□□ 0.1
PMS1P54277 TUBB8P8-201ENST00000458717 1058 ntBASIC15.69■□□□□ 0.1
PMS1P54277 RN7SL560P-201ENST00000577943 264 ntBASIC15.69■□□□□ 0.1
PMS1P54277 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 AP000346.4-201ENST00000614827 381 ntBASIC15.69■□□□□ 0.1
PMS1P54277 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PMS1P54277 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.69■□□□□ 0.1
PMS1P54277 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.69■□□□□ 0.1
PMS1P54277 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PMS1P54277 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.69■□□□□ 0.1
PMS1P54277 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 AC114271.1-201ENST00000612689 2813 ntBASIC15.69■□□□□ 0.1
PMS1P54277 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 AC019294.4-201ENST00000561777 2905 ntBASIC15.69■□□□□ 0.1
PMS1P54277 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PMS1P54277 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 CICP20-201ENST00000443330 2801 ntBASIC15.68■□□□□ 0.1
PMS1P54277 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 AC021723.1-201ENST00000486306 515 ntBASIC15.68■□□□□ 0.1
PMS1P54277 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.68■□□□□ 0.1
PMS1P54277 RNA5SP412-201ENST00000516234 123 ntBASIC15.68■□□□□ 0.1
PMS1P54277 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 AC140658.4-201ENST00000561990 352 ntBASIC15.68■□□□□ 0.1
PMS1P54277 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.68■□□□□ 0.1
PMS1P54277 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.68■□□□□ 0.1
PMS1P54277 KRT18P8-201ENST00000581937 1246 ntBASIC15.68■□□□□ 0.1
PMS1P54277 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.68■□□□□ 0.1
PMS1P54277 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PMS1P54277 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
PMS1P54277 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.68■□□□□ 0.1
PMS1P54277 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PMS1P54277 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PMS1P54277 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms