Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 RN7SL81P-201ENST00000493781 261 ntBASIC13.07□□□□□ -0.32
SSR4P51571 GOLGA2P8-201ENST00000505201 779 ntBASIC13.07□□□□□ -0.32
SSR4P51571 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.07□□□□□ -0.32
SSR4P51571 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.07□□□□□ -0.32
SSR4P51571 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
SSR4P51571 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.07□□□□□ -0.32
SSR4P51571 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.07□□□□□ -0.32
SSR4P51571 AL031713.1-201ENST00000564813 661 ntBASIC13.07□□□□□ -0.32
SSR4P51571 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.07□□□□□ -0.32
SSR4P51571 AL133467.4-201ENST00000602953 725 ntBASIC13.07□□□□□ -0.32
SSR4P51571 AC087392.5-201ENST00000612517 489 ntBASIC13.07□□□□□ -0.32
SSR4P51571 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSR4P51571 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.07□□□□□ -0.32
SSR4P51571 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.07□□□□□ -0.32
SSR4P51571 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SSR4P51571 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SSR4P51571 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSR4P51571 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.07□□□□□ -0.32
SSR4P51571 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSR4P51571 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.06□□□□□ -0.32
SSR4P51571 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.06□□□□□ -0.32
SSR4P51571 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSR4P51571 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.06□□□□□ -0.32
SSR4P51571 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.06□□□□□ -0.32
SSR4P51571 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.06□□□□□ -0.32
SSR4P51571 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 AC138701.2-201ENST00000553634 226 ntBASIC13.06□□□□□ -0.32
SSR4P51571 NDUFB10P1-201ENST00000567319 521 ntBASIC13.06□□□□□ -0.32
SSR4P51571 RN7SL665P-201ENST00000578793 300 ntBASIC13.06□□□□□ -0.32
SSR4P51571 SIGLEC22P-201ENST00000599104 714 ntBASIC13.06□□□□□ -0.32
SSR4P51571 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.06□□□□□ -0.32
SSR4P51571 AL805961.1-201ENST00000642026 753 ntBASIC13.06□□□□□ -0.32
SSR4P51571 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.06□□□□□ -0.32
SSR4P51571 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 SHMT1P1-201ENST00000419974 1312 ntBASIC13.06□□□□□ -0.32
SSR4P51571 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSR4P51571 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.06□□□□□ -0.32
SSR4P51571 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSR4P51571 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSR4P51571 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.05□□□□□ -0.32
SSR4P51571 AC067931.2-201ENST00000623655 2003 ntBASIC13.05□□□□□ -0.32
SSR4P51571 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSR4P51571 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSR4P51571 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms