Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.75□□□□□ -0.21
HLCSP50747 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 AP002761.4-201ENST00000565433 3361 ntBASIC13.75□□□□□ -0.21
HLCSP50747 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.75□□□□□ -0.21
HLCSP50747 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.75□□□□□ -0.21
HLCSP50747 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HLCSP50747 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HLCSP50747 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HLCSP50747 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HLCSP50747 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.75□□□□□ -0.21
HLCSP50747 AL133338.1-201ENST00000565695 1517 ntBASIC13.74□□□□□ -0.21
HLCSP50747 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.74□□□□□ -0.21
HLCSP50747 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HLCSP50747 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.74□□□□□ -0.21
HLCSP50747 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.74□□□□□ -0.21
HLCSP50747 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.74□□□□□ -0.21
HLCSP50747 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.74□□□□□ -0.21
HLCSP50747 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.74□□□□□ -0.21
HLCSP50747 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.74□□□□□ -0.21
HLCSP50747 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
HLCSP50747 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 AC011840.2-201ENST00000563063 1520 ntBASIC13.74□□□□□ -0.21
HLCSP50747 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.74□□□□□ -0.21
HLCSP50747 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HLCSP50747 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
HLCSP50747 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.73□□□□□ -0.21
HLCSP50747 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLCSP50747 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.73□□□□□ -0.21
HLCSP50747 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HLCSP50747 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
HLCSP50747 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.73□□□□□ -0.21
HLCSP50747 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 RN7SKP230-201ENST00000365642 335 ntBASIC13.73□□□□□ -0.21
HLCSP50747 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.73□□□□□ -0.21
HLCSP50747 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.73□□□□□ -0.21
HLCSP50747 AL354877.1-201ENST00000424412 413 ntBASIC13.73□□□□□ -0.21
HLCSP50747 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.73□□□□□ -0.21
HLCSP50747 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.73□□□□□ -0.21
HLCSP50747 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLCSP50747 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms