Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 RN7SL665P-201ENST00000578793 300 ntBASIC15.73■□□□□ 0.11
RFC5P40937 MIR4522-201ENST00000584932 87 ntBASIC15.73■□□□□ 0.11
RFC5P40937 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.73■□□□□ 0.11
RFC5P40937 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 AL021707.6-201ENST00000609212 491 ntBASIC15.73■□□□□ 0.11
RFC5P40937 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 AC097376.2-205ENST00000610159 5334 ntBASIC15.73■□□□□ 0.11
RFC5P40937 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RFC5P40937 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.73■□□□□ 0.11
RFC5P40937 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RFC5P40937 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.73■□□□□ 0.11
RFC5P40937 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 TEKT4P2-202ENST00000559466 1312 ntBASIC15.72■□□□□ 0.11
RFC5P40937 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 AC005252.3-201ENST00000623855 2258 ntBASIC15.72■□□□□ 0.11
RFC5P40937 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RFC5P40937 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 HINT2P1-201ENST00000419438 481 ntBASIC15.72■□□□□ 0.11
RFC5P40937 PPP1R2P4-201ENST00000424051 595 ntBASIC15.72■□□□□ 0.11
RFC5P40937 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.72■□□□□ 0.11
RFC5P40937 NOC2LP1-201ENST00000450578 752 ntBASIC15.72■□□□□ 0.11
RFC5P40937 RN7SL81P-201ENST00000493781 261 ntBASIC15.72■□□□□ 0.11
RFC5P40937 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.72■□□□□ 0.11
RFC5P40937 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.72■□□□□ 0.11
RFC5P40937 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 AC138894.2-201ENST00000602838 371 ntBASIC15.72■□□□□ 0.11
RFC5P40937 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC5P40937 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC5P40937 AC040160.2-201ENST00000623816 1675 ntBASIC15.72■□□□□ 0.11
RFC5P40937 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.72■□□□□ 0.11
RFC5P40937 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.72■□□□□ 0.11
RFC5P40937 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RFC5P40937 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RFC5P40937 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RFC5P40937 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 AL591122.2-201ENST00000624125 1853 ntBASIC15.71■□□□□ 0.11
RFC5P40937 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RFC5P40937 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 AC074138.1-201ENST00000611182 1303 ntBASIC15.71■□□□□ 0.11
RFC5P40937 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 AC016397.2-201ENST00000624848 1985 ntBASIC15.71■□□□□ 0.11
RFC5P40937 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.71■□□□□ 0.11
RFC5P40937 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 AL627422.1-201ENST00000434104 580 ntBASIC15.71■□□□□ 0.11
RFC5P40937 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.71■□□□□ 0.11
RFC5P40937 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC5P40937 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms