Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 RPL3P5-201ENST00000441645 1232 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 VENTXP4-201ENST00000449029 958 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 MIR5001-201ENST00000580185 100 ntBASIC17.79■□□□□ 0.44
COL15A1P39059 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
COL15A1P39059 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.79■□□□□ 0.44
COL15A1P39059 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.79■□□□□ 0.44
COL15A1P39059 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL15A1P39059 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COL15A1P39059 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 AC015909.5-201ENST00000624336 2266 ntBASIC17.78■□□□□ 0.44
COL15A1P39059 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 AC152010.1-201ENST00000415779 2006 ntBASIC17.78■□□□□ 0.44
COL15A1P39059 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
COL15A1P39059 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL15A1P39059 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COL15A1P39059 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 AC092903.1-201ENST00000466506 262 ntBASIC17.78■□□□□ 0.44
COL15A1P39059 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.78■□□□□ 0.44
COL15A1P39059 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 AC023968.2-201ENST00000560593 1049 ntBASIC17.78■□□□□ 0.44
COL15A1P39059 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.78■□□□□ 0.44
COL15A1P39059 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.78■□□□□ 0.44
COL15A1P39059 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.77■□□□□ 0.44
COL15A1P39059 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.77■□□□□ 0.44
COL15A1P39059 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.77■□□□□ 0.44
COL15A1P39059 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
COL15A1P39059 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 AC016397.2-201ENST00000624848 1985 ntBASIC17.77■□□□□ 0.44
COL15A1P39059 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL15A1P39059 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
COL15A1P39059 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.77■□□□□ 0.44
COL15A1P39059 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.77■□□□□ 0.44
COL15A1P39059 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.77■□□□□ 0.44
COL15A1P39059 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.77■□□□□ 0.44
COL15A1P39059 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.77■□□□□ 0.44
COL15A1P39059 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL15A1P39059 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
COL15A1P39059 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.77■□□□□ 0.43
COL15A1P39059 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.77■□□□□ 0.43
COL15A1P39059 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
COL15A1P39059 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
COL15A1P39059 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC17.77■□□□□ 0.43
COL15A1P39059 AP000244.1-201ENST00000424582 201 ntBASIC17.77■□□□□ 0.43
COL15A1P39059 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.77■□□□□ 0.43
COL15A1P39059 ALG1L7P-201ENST00000502317 768 ntBASIC17.77■□□□□ 0.43
COL15A1P39059 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.43
COL15A1P39059 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.77■□□□□ 0.43
COL15A1P39059 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.77■□□□□ 0.43
COL15A1P39059 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.77■□□□□ 0.43
COL15A1P39059 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.77■□□□□ 0.43
COL15A1P39059 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.77■□□□□ 0.43
COL15A1P39059 NAV1-210ENST00000593583 726 ntBASIC17.77■□□□□ 0.43
COL15A1P39059 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC17.77■□□□□ 0.43
COL15A1P39059 AL627230.2-201ENST00000613254 655 ntBASIC17.77■□□□□ 0.43
COL15A1P39059 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL15A1P39059 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
COL15A1P39059 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
COL15A1P39059 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL15A1P39059 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
COL15A1P39059 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms