Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 KRT8P4-201ENST00000509735 1454 ntBASIC15.7■□□□□ 0.1
KRT9P35527 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 AL445209.1-201ENST00000607269 3491 ntBASIC15.7■□□□□ 0.1
KRT9P35527 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 MARK2P9-201ENST00000430958 1727 ntBASIC15.69■□□□□ 0.1
KRT9P35527 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 TP73-211ENST00000604074 4806 ntTSL 5 BASIC15.69■□□□□ 0.1
KRT9P35527 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 AL136309.1-201ENST00000403917 691 ntBASIC15.69■□□□□ 0.1
KRT9P35527 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.69■□□□□ 0.1
KRT9P35527 CICP12-201ENST00000455801 843 ntBASIC15.69■□□□□ 0.1
KRT9P35527 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.69■□□□□ 0.1
KRT9P35527 AC079316.1-201ENST00000548397 411 ntBASIC15.69■□□□□ 0.1
KRT9P35527 RAB43P1-201ENST00000561790 589 ntBASIC15.69■□□□□ 0.1
KRT9P35527 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.69■□□□□ 0.1
KRT9P35527 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.69■□□□□ 0.1
KRT9P35527 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KRT9P35527 AC004899.2-201ENST00000622993 3860 ntBASIC15.69■□□□□ 0.1
KRT9P35527 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AC063926.2-201ENST00000623766 1308 ntBASIC15.68■□□□□ 0.1
KRT9P35527 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KRT9P35527 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.68■□□□□ 0.1
KRT9P35527 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KRT9P35527 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AC112492.5-201ENST00000421897 457 ntBASIC15.68■□□□□ 0.1
KRT9P35527 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT9P35527 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 AL035414.1-201ENST00000451327 857 ntBASIC15.68■□□□□ 0.1
KRT9P35527 CTBP2P5-201ENST00000454986 1264 ntBASIC15.68■□□□□ 0.1
KRT9P35527 AC023310.1-201ENST00000554836 735 ntBASIC15.68■□□□□ 0.1
KRT9P35527 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT9P35527 KRT18P8-201ENST00000581937 1246 ntBASIC15.68■□□□□ 0.1
KRT9P35527 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 AL512343.1-201ENST00000605837 169 ntBASIC15.68■□□□□ 0.1
KRT9P35527 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT9P35527 AC027601.3-201ENST00000622907 509 ntBASIC15.68■□□□□ 0.1
KRT9P35527 AL035252.4-201ENST00000624174 288 ntBASIC15.68■□□□□ 0.1
KRT9P35527 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT9P35527 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KRT9P35527 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT9P35527 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AC083964.2-201ENST00000623988 2396 ntBASIC15.68■□□□□ 0.1
KRT9P35527 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT9P35527 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT9P35527 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms