Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXD12P35452 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
HOXD12P35452 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXD12P35452 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
HOXD12P35452 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
HOXD12P35452 ST20-AS1-201ENST00000560255 4223 ntBASIC14.33□□□□□ -0.11
HOXD12P35452 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HOXD12P35452 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXD12P35452 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXD12P35452 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HOXD12P35452 KRT17P5-201ENST00000332088 839 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HOXD12P35452 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HOXD12P35452 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 AC004837.1-201ENST00000446267 564 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 AC024293.1-201ENST00000467930 498 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 AC124068.2-201ENST00000569473 1109 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXD12P35452 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 MIR3180-2-201ENST00000581748 88 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 AC140113.1-201ENST00000603467 169 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.33□□□□□ -0.12
HOXD12P35452 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HOXD12P35452 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HOXD12P35452 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.33□□□□□ -0.12
HOXD12P35452 CICP16-201ENST00000502609 2813 ntBASIC14.33□□□□□ -0.12
HOXD12P35452 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 PPT1-213ENST00000641319 2388 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AL357563.1-201ENST00000404728 395 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 AC234644.1-201ENST00000406065 370 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 DPY19L2P5-201ENST00000456300 331 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AC010234.1-201ENST00000494599 870 ntBASIC14.32□□□□□ -0.12
HOXD12P35452 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXD12P35452 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC14.32□□□□□ -0.12
HOXD12P35452 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXD12P35452 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXD12P35452 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HOXD12P35452 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms