Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB4AP20338 AL355306.1-201ENST00000415580 579 ntBASIC11.02□□□□□ -0.65
RAB4AP20338 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
RAB4AP20338 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB4AP20338 EMBP1-201ENST00000458200 901 ntBASIC11.02□□□□□ -0.65
RAB4AP20338 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 UNC93B7-201ENST00000509439 705 ntBASIC11.02□□□□□ -0.65
RAB4AP20338 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 FAM86C2P-203ENST00000528684 1004 ntBASIC11.02□□□□□ -0.65
RAB4AP20338 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.02□□□□□ -0.65
RAB4AP20338 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.02□□□□□ -0.65
RAB4AP20338 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 AC064836.3-201ENST00000607928 673 ntBASIC11.02□□□□□ -0.65
RAB4AP20338 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 TRERF1-202ENST00000354325 4138 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC11.02□□□□□ -0.65
RAB4AP20338 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
RAB4AP20338 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
RAB4AP20338 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 DNAH2-202ENST00000570791 2994 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
RAB4AP20338 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 AC093909.1-201ENST00000504731 1122 ntBASIC11.01□□□□□ -0.65
RAB4AP20338 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 SLED1-202ENST00000512051 380 ntBASIC11.01□□□□□ -0.65
RAB4AP20338 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.01□□□□□ -0.65
RAB4AP20338 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
RAB4AP20338 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.01□□□□□ -0.65
RAB4AP20338 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB4AP20338 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB4AP20338 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.01□□□□□ -0.65
RAB4AP20338 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
RAB4AP20338 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
RAB4AP20338 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms