Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 AC012617.1-204ENST00000586340 2305 ntBASIC13.35□□□□□ -0.27
CCL4P13236 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.35□□□□□ -0.27
CCL4P13236 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CCL4P13236 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 AP001267.2-201ENST00000532619 2086 ntBASIC13.35□□□□□ -0.27
CCL4P13236 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.35□□□□□ -0.27
CCL4P13236 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.35□□□□□ -0.27
CCL4P13236 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CCL4P13236 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL4P13236 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL4P13236 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CCL4P13236 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 HMGA1P1-201ENST00000415560 1062 ntBASIC13.34□□□□□ -0.27
CCL4P13236 KRT18P46-201ENST00000435568 1279 ntBASIC13.34□□□□□ -0.27
CCL4P13236 KRT18P15-201ENST00000458108 1291 ntBASIC13.34□□□□□ -0.27
CCL4P13236 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 AC090136.2-201ENST00000517809 420 ntBASIC13.34□□□□□ -0.27
CCL4P13236 BATF-202ENST00000555504 361 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 AC132825.4-202ENST00000578792 434 ntBASIC13.34□□□□□ -0.27
CCL4P13236 RN7SL596P-201ENST00000582123 288 ntBASIC13.34□□□□□ -0.27
CCL4P13236 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.34□□□□□ -0.27
CCL4P13236 AL031673.1-201ENST00000611460 466 ntBASIC13.34□□□□□ -0.27
CCL4P13236 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.34□□□□□ -0.27
CCL4P13236 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 AL365181.1-201ENST00000564032 1828 ntBASIC13.34□□□□□ -0.27
CCL4P13236 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.34□□□□□ -0.27
CCL4P13236 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC13.34□□□□□ -0.27
CCL4P13236 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CCL4P13236 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CCL4P13236 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CCL4P13236 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL4P13236 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CCL4P13236 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.33□□□□□ -0.27
CCL4P13236 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.33□□□□□ -0.27
CCL4P13236 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL4P13236 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL4P13236 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
CCL4P13236 HSPA8P5-201ENST00000456928 2069 ntBASIC13.33□□□□□ -0.27
CCL4P13236 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CCL4P13236 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CCL4P13236 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CCL4P13236 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.33□□□□□ -0.28
CCL4P13236 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 DUT-208ENST00000559540 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CCL4P13236 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CCL4P13236 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.33□□□□□ -0.28
CCL4P13236 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms