Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.8■□□□□ 0.28
TOP1P11387 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.8■□□□□ 0.28
TOP1P11387 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 AC008723.1-201ENST00000506922 207 ntBASIC16.8■□□□□ 0.28
TOP1P11387 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TOP1P11387 MIR3907-201ENST00000579424 151 ntBASIC16.8■□□□□ 0.28
TOP1P11387 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.8■□□□□ 0.28
TOP1P11387 AL133499.1-201ENST00000596207 608 ntBASIC16.8■□□□□ 0.28
TOP1P11387 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.8■□□□□ 0.28
TOP1P11387 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.8■□□□□ 0.28
TOP1P11387 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.8■□□□□ 0.28
TOP1P11387 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TOP1P11387 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.8■□□□□ 0.28
TOP1P11387 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 FAM90A2P-201ENST00000511144 1395 ntBASIC16.79■□□□□ 0.28
TOP1P11387 FAM90A25P-201ENST00000528404 1395 ntBASIC16.79■□□□□ 0.28
TOP1P11387 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TOP1P11387 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 RPS9P1-201ENST00000419943 583 ntBASIC16.79■□□□□ 0.28
TOP1P11387 AC234782.1-201ENST00000451950 919 ntBASIC16.79■□□□□ 0.28
TOP1P11387 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
TOP1P11387 RNA5SP423-201ENST00000517127 109 ntBASIC16.79■□□□□ 0.28
TOP1P11387 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TOP1P11387 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TOP1P11387 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TOP1P11387 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TOP1P11387 TBC1D3J-201ENST00000620719 1426 ntBASIC16.79■□□□□ 0.28
TOP1P11387 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 OR2K2-202ENST00000374428 1038 ntBASIC16.78■□□□□ 0.28
TOP1P11387 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP1P11387 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP1P11387 CEP164P1-201ENST00000455142 418 ntBASIC16.78■□□□□ 0.28
TOP1P11387 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP1P11387 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP1P11387 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.78■□□□□ 0.28
TOP1P11387 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP1P11387 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
TOP1P11387 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.78■□□□□ 0.28
TOP1P11387 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 AC015967.2-201ENST00000624092 234 ntBASIC16.78■□□□□ 0.28
TOP1P11387 AC006435.4-201ENST00000625037 234 ntBASIC16.78■□□□□ 0.28
TOP1P11387 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.78■□□□□ 0.28
TOP1P11387 AL356737.1-201ENST00000634391 234 ntBASIC16.78■□□□□ 0.28
TOP1P11387 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TOP1P11387 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.78■□□□□ 0.28
TOP1P11387 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms