Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CCNYL3P0C7X3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 VDAC1P1-201ENST00000439229 848 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CICP12-201ENST00000455801 843 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 SCARNA21-201ENST00000517026 139 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 RN7SL574P-201ENST00000581512 297 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AC073575.2-201ENST00000614212 627 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 AL353770.1-201ENST00000614915 403 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 BEND3P1-201ENST00000421591 1944 ntBASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CCNYL3P0C7X3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 CICP17-201ENST00000418553 2377 ntBASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 KLF2P1-201ENST00000447438 1042 ntBASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC234782.1-201ENST00000451950 919 ntBASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 ACTR6P1-201ENST00000514311 1104 ntBASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC13.93□□□□□ -0.18
CCNYL3P0C7X3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 321.8 ms