Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 AC064801.2-201ENST00000625052 1303 ntBASIC12.8□□□□□ -0.36
CNOT4O95628 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.8□□□□□ -0.36
CNOT4O95628 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CNOT4O95628 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CNOT4O95628 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CNOT4O95628 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 AL161932.2-201ENST00000435436 679 ntBASIC12.79□□□□□ -0.36
CNOT4O95628 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.79□□□□□ -0.36
CNOT4O95628 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.79□□□□□ -0.36
CNOT4O95628 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.79□□□□□ -0.36
CNOT4O95628 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.79□□□□□ -0.36
CNOT4O95628 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.79□□□□□ -0.36
CNOT4O95628 AC140658.4-201ENST00000561990 352 ntBASIC12.79□□□□□ -0.36
CNOT4O95628 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 FGFR3P5-201ENST00000564496 886 ntBASIC12.79□□□□□ -0.36
CNOT4O95628 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.79□□□□□ -0.36
CNOT4O95628 RN7SL774P-201ENST00000577467 290 ntBASIC12.79□□□□□ -0.36
CNOT4O95628 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.79□□□□□ -0.36
CNOT4O95628 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CNOT4O95628 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.79□□□□□ -0.36
CNOT4O95628 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 AC215219.1-201ENST00000400706 1817 ntBASIC12.78□□□□□ -0.36
CNOT4O95628 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CNOT4O95628 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CNOT4O95628 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CNOT4O95628 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms