Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 AC020917.4-201ENST00000623994 1999 ntBASIC13.74□□□□□ -0.21
GSC2O15499 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 AC009093.10-201ENST00000641956 1442 ntBASIC13.74□□□□□ -0.21
GSC2O15499 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GSC2O15499 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 SNORA50C-201ENST00000408535 133 ntBASIC13.74□□□□□ -0.21
GSC2O15499 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.74□□□□□ -0.21
GSC2O15499 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.74□□□□□ -0.21
GSC2O15499 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.74□□□□□ -0.21
GSC2O15499 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 MIR3687-2-201ENST00000577708 61 ntBASIC13.74□□□□□ -0.21
GSC2O15499 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.74□□□□□ -0.21
GSC2O15499 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 MIR3687-1-201ENST00000614492 61 ntBASIC13.74□□□□□ -0.21
GSC2O15499 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 AC007431.3-201ENST00000623221 587 ntBASIC13.74□□□□□ -0.21
GSC2O15499 SNORA50.1-201ENST00000628590 135 ntBASIC13.74□□□□□ -0.21
GSC2O15499 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GSC2O15499 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.74□□□□□ -0.21
GSC2O15499 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GSC2O15499 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.73□□□□□ -0.21
GSC2O15499 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GSC2O15499 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 AC087499.5-201ENST00000452760 1342 ntBASIC13.73□□□□□ -0.21
GSC2O15499 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
GSC2O15499 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GSC2O15499 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.73□□□□□ -0.21
GSC2O15499 AC120057.1-201ENST00000483947 663 ntBASIC13.73□□□□□ -0.21
GSC2O15499 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC13.73□□□□□ -0.21
GSC2O15499 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.73□□□□□ -0.21
GSC2O15499 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GSC2O15499 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC13.73□□□□□ -0.21
GSC2O15499 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GSC2O15499 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms