Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 AC073869.1-201ENST00000415574 2762 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 FAM21FP-201ENST00000426241 1131 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 MIR6799-201ENST00000620297 69 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 MBLAC2-202ENST00000514906 1936 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 AC005562.1-201ENST00000583030 3219 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 AC023794.5-201ENST00000564380 2157 ntBASIC14.56□□□□□ -0.08
CCDC78A2IDD5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC78A2IDD5 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AC005252.3-201ENST00000623855 2258 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AC092053.3-201ENST00000641308 4975 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AC079178.1-201ENST00000420915 656 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 EEF1DP1-201ENST00000585891 896 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AC244157.2-201ENST00000616239 1006 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 Z98259.2-201ENST00000641583 609 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AL928654.5-201ENST00000624831 2501 ntBASIC14.55□□□□□ -0.08
CCDC78A2IDD5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC78A2IDD5 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC78A2IDD5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CCDC78A2IDD5 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC78A2IDD5 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms