Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 BCRP4-201ENST00000506079 804 ntBASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 CTBP2P6-201ENST00000526402 1229 ntBASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.57■□□□□ 0.88
SHANK2Q9UPX8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC005912.2-201ENST00000619492 2400 ntBASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 CFL1P6-201ENST00000400899 494 ntBASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AC092612.1-201ENST00000514501 998 ntBASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SHANK2Q9UPX8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 HNRNPA1P21-201ENST00000424115 961 ntBASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 AC010086.2-201ENST00000428616 226 ntBASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 FBXO36P1-201ENST00000579006 471 ntBASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 RN7SL121P-201ENST00000584223 273 ntBASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHANK2Q9UPX8 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms