Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 AL512430.1-201ENST00000392575 860 ntBASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 AL512310.5-201ENST00000551999 515 ntBASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 MIR3147-201ENST00000577811 66 ntBASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 AC005632.3-201ENST00000605544 308 ntBASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 YRDCP1-201ENST00000621419 643 ntBASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HMG20BQ9P0W2 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 NOC2LP1-201ENST00000450578 752 ntBASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 RPS2P36-201ENST00000456516 831 ntBASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HMG20BQ9P0W2 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AC074138.1-201ENST00000611182 1303 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AP000356.3-201ENST00000382243 753 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 FXNP2-201ENST00000411625 547 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 MRPL22P1-201ENST00000505398 616 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 SPCS2P2-201ENST00000603270 608 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 AC242376.2-201ENST00000619355 883 ntBASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20BQ9P0W2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms