Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AC074138.1-201ENST00000611182 1303 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AL627422.1-201ENST00000434104 580 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 NOC2LP1-201ENST00000450578 752 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 MIR3147-201ENST00000577811 66 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AC060766.1-201ENST00000590824 627 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AC005632.3-201ENST00000605544 308 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AC006213.4-201ENST00000616184 634 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 AC067750.1-201ENST00000608826 6545 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 LINC01230-201ENST00000625222 3017 ntBASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.53■□□□□ 0.24
GPCPD1Q9NPB8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 TUBB8P4-201ENST00000511806 1324 ntBASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 USP17L6P-201ENST00000382470 1197 ntBASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC005740.1-201ENST00000515639 522 ntBASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPCPD1Q9NPB8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 AC023908.3-201ENST00000564211 3047 ntBASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.52■□□□□ 0.23
GPCPD1Q9NPB8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPCPD1Q9NPB8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms