Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 PDPN-208ENST00000509009 571 ntTSL 4 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 AP003170.2-201ENST00000544730 786 ntBASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC9.21□□□□□ -0.93
ALMS1Q8TCU4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 AC006486.2-201ENST00000624246 2199 ntBASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 AC126177.1-201ENST00000547829 2218 ntBASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 PGAM1P10-201ENST00000402426 761 ntBASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 RN7SL460P-201ENST00000582806 258 ntBASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
ALMS1Q8TCU4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 HNRNPA1P3-201ENST00000440968 551 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 ATP5G1P7-201ENST00000444398 400 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 MED11-203ENST00000575284 652 ntTSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 BICD1P1-201ENST00000457832 1222 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 YBX1P3-201ENST00000468366 909 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 RN7SL363P-201ENST00000482412 273 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 GOLGA2P10-201ENST00000550961 817 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 PMM2-216ENST00000569958 698 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 RN7SL2-201ENST00000490232 300 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 RN7SL4P-201ENST00000584058 295 ntBASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC9.2□□□□□ -0.94
ALMS1Q8TCU4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms