Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 BAATP1-201ENST00000412284 1225 ntBASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 POM121L8P-201ENST00000417732 1281 ntBASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 POM121L9P-203ENST00000441984 1285 ntBASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 RN7SL204P-201ENST00000582831 262 ntBASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 AC138466.3-201ENST00000619983 221 ntBASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
DNAAF1Q8NEP3 AL022313.4-201ENST00000562756 2046 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AL928654.5-201ENST00000624831 2501 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 CLUHP2-201ENST00000426660 1303 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 PCDHA6-201ENST00000378126 3267 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 BCRP1-201ENST00000444246 691 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 PTP4A1P2-201ENST00000546033 454 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 TP53TG3HP-202ENST00000569755 579 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AC027796.2-201ENST00000575326 344 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 AC145423.3-201ENST00000615987 467 ntBASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DNAAF1Q8NEP3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 AC134312.5-201ENST00000568031 1313 ntBASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DNAAF1Q8NEP3 MIR661-201ENST00000384842 89 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms