Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 FRMPD2B-201ENST00000431305 1347 ntBASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM48Q8IWZ4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 KRT18P36-201ENST00000411618 1276 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TSPY25P-201ENST00000429463 745 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 FGFR3P5-201ENST00000564496 886 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LINC01230-201ENST00000625222 3017 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 FP325330.2-201ENST00000624219 5630 ntBASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRIM48Q8IWZ4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC007274.2-201ENST00000421675 662 ntBASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 OR2R1P-201ENST00000441404 914 ntBASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM48Q8IWZ4 AC003686.1-201ENST00000550956 1034 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms