Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RP1L1Q8IWN7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 RNA5SP359-201ENST00000364838 113 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 AC139712.1-201ENST00000378256 1875 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 AC138035.3-201ENST00000622706 2791 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 RPL3P5-201ENST00000441645 1232 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 GOLGA2P7-209ENST00000560408 745 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 MIR6816-201ENST00000620368 66 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 AL672207.1-201ENST00000328462 1570 ntBASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RP1L1Q8IWN7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 AF274858.1-201ENST00000406288 372 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 HLA-DPA2-205ENST00000433582 733 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 AL645933.1-201ENST00000440087 609 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 AC018638.5-201ENST00000450885 754 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 AC083801.1-201ENST00000491689 358 ntBASIC13□□□□□ -0.33
RP1L1Q8IWN7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RP1L1Q8IWN7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RP1L1Q8IWN7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms