Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LYSMD3Q7Z3D4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PTENP1-202ENST00000532280 3996 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CR383656.2-201ENST00000548656 2254 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 TCAM1P-207ENST00000485295 1537 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 RN7SKP214-201ENST00000364208 315 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 MTND4LP12-201ENST00000448237 295 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HIST2H2BC-201ENST00000498492 580 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC140658.4-201ENST00000561990 352 ntBASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LYSMD3Q7Z3D4 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 MST1P2-201ENST00000457982 2291 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 KRT8P21-201ENST00000430398 1491 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 USP17L6P-201ENST00000382470 1197 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AL008707.1-201ENST00000422498 534 ntBASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.4□□□□□ -0.1
LYSMD3Q7Z3D4 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms