Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
RNF44Q7L0R7 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AL662890.1-201ENST00000396818 632 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PDIA3P2-201ENST00000428073 158 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AC073150.1-201ENST00000450406 1084 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AC012618.1-201ENST00000461223 412 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RN7SL277P-201ENST00000481521 288 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RN7SL574P-201ENST00000581512 297 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 AL022313.4-201ENST00000562756 2046 ntBASIC13.73□□□□□ -0.21
RNF44Q7L0R7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF44Q7L0R7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 USP17L6P-201ENST00000382470 1197 ntBASIC13.72□□□□□ -0.21
RNF44Q7L0R7 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF44Q7L0R7 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms