Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 AC103724.2-201ENST00000520355 476 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 SNU13-204ENST00000402458 462 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 RN7SKP212-201ENST00000410851 328 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 ABCD1P3-201ENST00000562927 605 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 CDKN2A-AS1-201ENST00000441769 823 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 AL450346.2-201ENST00000495602 1024 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 MYL6-215ENST00000549566 685 ntTSL 2 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC11.47□□□□□ -0.57
VPS13CQ709C8 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 STK3-218ENST00000617590 2485 ntTSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VPS13CQ709C8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
VPS13CQ709C8 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 ASS1P1-201ENST00000402854 1237 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AL512310.5-201ENST00000551999 515 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 OR3A1-202ENST00000615105 966 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 FAM86JP-202ENST00000484500 988 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AC015912.3-201ENST00000619432 348 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 AC134878.2-201ENST00000620700 1265 ntBASIC11.46□□□□□ -0.57
VPS13CQ709C8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
VPS13CQ709C8 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
VPS13CQ709C8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13CQ709C8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13CQ709C8 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
VPS13CQ709C8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 CCL19-202ENST00000378800 414 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 TPT1P9-201ENST00000413759 514 ntBASIC11.46□□□□□ -0.58
VPS13CQ709C8 AC093106.1-201ENST00000437271 352 ntBASIC11.46□□□□□ -0.58
VPS13CQ709C8 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC11.46□□□□□ -0.58
VPS13CQ709C8 RN7SL340P-201ENST00000470792 296 ntBASIC11.46□□□□□ -0.58
VPS13CQ709C8 ALDOAP1-201ENST00000491506 1078 ntBASIC11.46□□□□□ -0.58
VPS13CQ709C8 RPL10P8-201ENST00000522888 313 ntBASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms