Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AC005840.4-201ENST00000541242 2494 ntBASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.03■□□□□ 0.16
HERC4Q5GLZ8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 AC004899.1-201ENST00000424687 1714 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 KRT8P24-201ENST00000560290 1559 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 NUP210P1-202ENST00000504322 710 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 BNIP3P13-201ENST00000599968 566 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 AC100757.4-201ENST00000626934 759 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.02■□□□□ 0.16
HERC4Q5GLZ8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 LAP3P2-201ENST00000454686 1454 ntBASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HERC4Q5GLZ8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC008132.1-202ENST00000342005 1389 ntBASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AL157996.1-201ENST00000624684 2299 ntBASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC003686.1-201ENST00000550956 1034 ntBASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 AC011491.1-203ENST00000637688 543 ntBASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 LINC02486-201ENST00000604157 3000 ntBASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HERC4Q5GLZ8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms