Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AL512310.5-201ENST00000551999 515 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 AC026740.1-201ENST00000607068 791 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 MIR6799-201ENST00000620297 69 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 MIR600HG-201ENST00000449175 5984 ntBASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NIPAL4Q0D2K0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NIPAL4Q0D2K0 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 EIF4HP1-201ENST00000453115 687 ntBASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 AC091804.1-201ENST00000486888 567 ntBASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 MIR3615-201ENST00000581999 87 ntBASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
NIPAL4Q0D2K0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 AL928654.5-201ENST00000624831 2501 ntBASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
NIPAL4Q0D2K0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms