Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC100827.2-201ENST00000563214 1194 ntBASIC14.13□□□□□ -0.15
CDKL1Q00532 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKL1Q00532 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDKL1Q00532 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDKL1Q00532 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKL1Q00532 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKL1Q00532 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKL1Q00532 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKL1Q00532 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDKL1Q00532 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.13□□□□□ -0.15
CDKL1Q00532 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.13□□□□□ -0.15
CDKL1Q00532 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDKL1Q00532 AC126335.2-201ENST00000623362 4637 ntBASIC14.13□□□□□ -0.15
CDKL1Q00532 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDKL1Q00532 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AC022210.1-201ENST00000449856 793 ntBASIC14.12□□□□□ -0.15
CDKL1Q00532 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.12□□□□□ -0.15
CDKL1Q00532 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 AC021016.3-201ENST00000608367 477 ntBASIC14.12□□□□□ -0.15
CDKL1Q00532 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 LAP3P2-201ENST00000454686 1454 ntBASIC14.12□□□□□ -0.15
CDKL1Q00532 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDKL1Q00532 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.12□□□□□ -0.15
CDKL1Q00532 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.12□□□□□ -0.15
CDKL1Q00532 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDKL1Q00532 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.11□□□□□ -0.15
CDKL1Q00532 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDKL1Q00532 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.11□□□□□ -0.15
CDKL1Q00532 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms