Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.91□□□□□ -0.34
SUMO3P55854 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.91□□□□□ -0.34
SUMO3P55854 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
SUMO3P55854 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.91□□□□□ -0.34
SUMO3P55854 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.91□□□□□ -0.34
SUMO3P55854 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 SPTLC1P5-201ENST00000450718 252 ntBASIC12.91□□□□□ -0.34
SUMO3P55854 AL353637.1-201ENST00000451571 732 ntBASIC12.91□□□□□ -0.34
SUMO3P55854 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 AC116345.2-201ENST00000512837 523 ntBASIC12.91□□□□□ -0.34
SUMO3P55854 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.91□□□□□ -0.34
SUMO3P55854 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.91□□□□□ -0.34
SUMO3P55854 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SUMO3P55854 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SUMO3P55854 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
SUMO3P55854 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SUMO3P55854 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.9□□□□□ -0.34
SUMO3P55854 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.9□□□□□ -0.34
SUMO3P55854 RN7SL11P-201ENST00000471305 293 ntBASIC12.9□□□□□ -0.34
SUMO3P55854 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.9□□□□□ -0.34
SUMO3P55854 HIST2H2BC-201ENST00000498492 580 ntBASIC12.9□□□□□ -0.34
SUMO3P55854 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.9□□□□□ -0.34
SUMO3P55854 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.9□□□□□ -0.34
SUMO3P55854 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.9□□□□□ -0.34
SUMO3P55854 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
SUMO3P55854 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 LINC01783-202ENST00000614408 828 ntBASIC12.9□□□□□ -0.34
SUMO3P55854 MIR6787-201ENST00000616675 61 ntBASIC12.9□□□□□ -0.34
SUMO3P55854 BX284668.2-205ENST00000619677 828 ntBASIC12.9□□□□□ -0.34
SUMO3P55854 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.9□□□□□ -0.34
SUMO3P55854 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.9□□□□□ -0.34
SUMO3P55854 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.9□□□□□ -0.34
SUMO3P55854 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SUMO3P55854 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.9□□□□□ -0.34
SUMO3P55854 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SUMO3P55854 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.89□□□□□ -0.35
SUMO3P55854 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SUMO3P55854 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SUMO3P55854 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms