Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC006453.1-201ENST00000636037 1257 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.73■□□□□ 0.27
NEDD4P46934 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 KRT18P9-201ENST00000604826 1300 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 AL591122.2-201ENST00000624125 1853 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NEDD4P46934 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.73■□□□□ 0.27
NEDD4P46934 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 RPL13AP3-202ENST00000494676 1473 ntBASIC16.73■□□□□ 0.27
NEDD4P46934 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NEDD4P46934 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.73■□□□□ 0.27
NEDD4P46934 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEDD4P46934 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.72■□□□□ 0.27
NEDD4P46934 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.72■□□□□ 0.27
NEDD4P46934 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 DUTP3-201ENST00000450025 415 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 AP000358.1-201ENST00000456260 156 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 AL590824.1-201ENST00000403828 1349 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.72■□□□□ 0.27
NEDD4P46934 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 AC105206.1-202ENST00000314927 2368 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 AL359881.3-201ENST00000602640 1721 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 GOLGA8IP-202ENST00000611635 2100 ntBASIC16.72■□□□□ 0.27
NEDD4P46934 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NEDD4P46934 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.72■□□□□ 0.27
NEDD4P46934 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEDD4P46934 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEDD4P46934 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.71■□□□□ 0.27
NEDD4P46934 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.71■□□□□ 0.27
NEDD4P46934 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NEDD4P46934 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.71■□□□□ 0.27
NEDD4P46934 AC234782.1-201ENST00000451950 919 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.71■□□□□ 0.27
NEDD4P46934 CHCHD2P2-201ENST00000503744 321 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 GOLGA2P8-201ENST00000505201 779 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 AC114947.1-202ENST00000514136 344 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 IGLV3-15-201ENST00000518356 244 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEDD4P46934 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.71■□□□□ 0.27
NEDD4P46934 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.71■□□□□ 0.27
NEDD4P46934 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.71■□□□□ 0.27
NEDD4P46934 AC009145.4-201ENST00000625119 1294 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.71■□□□□ 0.27
NEDD4P46934 MARK2P16-201ENST00000605714 1723 ntBASIC16.71■□□□□ 0.27
NEDD4P46934 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEDD4P46934 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEDD4P46934 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEDD4P46934 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.71■□□□□ 0.27
NEDD4P46934 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms