Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.75□□□□□ -0.53
CEACAM3P40198 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CEACAM3P40198 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC006033.1-201ENST00000440505 426 ntBASIC11.75□□□□□ -0.53
CEACAM3P40198 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.75□□□□□ -0.53
CEACAM3P40198 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CEACAM3P40198 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC243960.2-201ENST00000600996 747 ntBASIC11.75□□□□□ -0.53
CEACAM3P40198 AC138649.2-201ENST00000615886 705 ntBASIC11.75□□□□□ -0.53
CEACAM3P40198 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AC244452.3-201ENST00000636814 210 ntBASIC11.75□□□□□ -0.53
CEACAM3P40198 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CEACAM3P40198 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CEACAM3P40198 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.75□□□□□ -0.53
CEACAM3P40198 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.74□□□□□ -0.53
CEACAM3P40198 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 CSPG4P11-201ENST00000560634 4910 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CEACAM3P40198 FAM86MP-201ENST00000340703 885 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CEACAM3P40198 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CEACAM3P40198 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.74□□□□□ -0.53
CEACAM3P40198 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC11.74□□□□□ -0.53
CEACAM3P40198 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC11.74□□□□□ -0.53
CEACAM3P40198 AC078875.1-201ENST00000431907 724 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.74□□□□□ -0.53
CEACAM3P40198 AC091804.1-201ENST00000486888 567 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 SCARNA21-201ENST00000517026 139 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC11.74□□□□□ -0.53
CEACAM3P40198 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC11.74□□□□□ -0.53
CEACAM3P40198 AC020914.3-201ENST00000594712 304 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 AL132994.2-201ENST00000603120 687 ntBASIC11.74□□□□□ -0.53
CEACAM3P40198 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.74□□□□□ -0.53
CEACAM3P40198 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms