Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
KRT9P35527 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.72■□□□□ 0.11
KRT9P35527 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KRT9P35527 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
KRT9P35527 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.71■□□□□ 0.11
KRT9P35527 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 KRT17P8-201ENST00000540749 863 ntBASIC15.71■□□□□ 0.11
KRT9P35527 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.71■□□□□ 0.11
KRT9P35527 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.71■□□□□ 0.11
KRT9P35527 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 AC073413.1-201ENST00000603927 732 ntBASIC15.71■□□□□ 0.11
KRT9P35527 AL162274.1-201ENST00000617191 1098 ntBASIC15.71■□□□□ 0.11
KRT9P35527 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KRT9P35527 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 AC005014.1-201ENST00000432006 2976 ntBASIC15.71■□□□□ 0.11
KRT9P35527 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
KRT9P35527 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KRT9P35527 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT9P35527 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
KRT9P35527 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.71■□□□□ 0.1
KRT9P35527 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT9P35527 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT9P35527 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
KRT9P35527 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KRT9P35527 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.71■□□□□ 0.1
KRT9P35527 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KRT9P35527 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT9P35527 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
KRT9P35527 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.7■□□□□ 0.1
KRT9P35527 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
KRT9P35527 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT9P35527 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 AC005034.1-201ENST00000426657 489 ntBASIC15.7■□□□□ 0.1
KRT9P35527 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 KLF2P4-201ENST00000451959 1225 ntBASIC15.7■□□□□ 0.1
KRT9P35527 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.7■□□□□ 0.1
KRT9P35527 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.7■□□□□ 0.1
KRT9P35527 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT9P35527 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.7■□□□□ 0.1
KRT9P35527 ZACNP1-201ENST00000612259 710 ntBASIC15.7■□□□□ 0.1
KRT9P35527 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KRT9P35527 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms