Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HOXD12P35452 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HOXD12P35452 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HOXD12P35452 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HOXD12P35452 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXD12P35452 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXD12P35452 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXD12P35452 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HOXD12P35452 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.36□□□□□ -0.11
HOXD12P35452 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXD12P35452 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HOXD12P35452 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.36□□□□□ -0.11
HOXD12P35452 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 MROH4P-201ENST00000431302 1578 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXD12P35452 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 GUSBP10-201ENST00000417412 665 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXD12P35452 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXD12P35452 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.35□□□□□ -0.11
HOXD12P35452 C2orf69P1-201ENST00000563532 1093 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.35□□□□□ -0.11
HOXD12P35452 MIR4472-1-201ENST00000584349 80 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.35□□□□□ -0.11
HOXD12P35452 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HOXD12P35452 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.35□□□□□ -0.11
HOXD12P35452 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HOXD12P35452 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HOXD12P35452 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HOXD12P35452 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HOXD12P35452 KRT8P28-201ENST00000433288 1390 ntBASIC14.34□□□□□ -0.11
HOXD12P35452 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HOXD12P35452 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXD12P35452 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HOXD12P35452 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HOXD12P35452 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 AC126335.2-201ENST00000623362 4637 ntBASIC14.34□□□□□ -0.11
HOXD12P35452 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HOXD12P35452 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 GCSHP3-201ENST00000431120 391 ntBASIC14.34□□□□□ -0.11
HOXD12P35452 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.34□□□□□ -0.11
HOXD12P35452 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HOXD12P35452 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXD12P35452 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXD12P35452 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.34□□□□□ -0.11
HOXD12P35452 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXD12P35452 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.34□□□□□ -0.11
HOXD12P35452 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms